Files
onepanel/pkg/workflow_execution.go
2020-04-28 16:59:24 -07:00

1379 lines
38 KiB
Go

package v1
import (
"bufio"
"encoding/base64"
"encoding/json"
"errors"
"fmt"
sq "github.com/Masterminds/squirrel"
"github.com/ghodss/yaml"
"github.com/onepanelio/core/api"
"github.com/onepanelio/core/pkg/util/label"
"io"
"io/ioutil"
"regexp"
"sort"
"strconv"
"strings"
"time"
wfv1 "github.com/argoproj/argo/pkg/apis/workflow/v1alpha1"
"github.com/argoproj/argo/workflow/common"
"github.com/argoproj/argo/workflow/templateresolution"
argoutil "github.com/argoproj/argo/workflow/util"
"github.com/argoproj/argo/workflow/validate"
argojson "github.com/argoproj/pkg/json"
"github.com/onepanelio/core/pkg/util"
"github.com/onepanelio/core/pkg/util/env"
"github.com/onepanelio/core/pkg/util/s3"
log "github.com/sirupsen/logrus"
"google.golang.org/grpc/codes"
corev1 "k8s.io/api/core/v1"
k8serrors "k8s.io/apimachinery/pkg/api/errors"
metav1 "k8s.io/apimachinery/pkg/apis/meta/v1"
"k8s.io/apimachinery/pkg/fields"
_ "k8s.io/client-go/plugin/pkg/client/auth"
)
var (
readEndOffset = env.GetEnv("ARTIFACT_RERPOSITORY_OBJECT_RANGE", "-102400")
workflowTemplateUIDLabelKey = "onepanel.io/workflow-template-uid"
workflowTemplateVersionLabelKey = "onepanel.io/workflow-template-version"
)
func typeWorkflow(wf *wfv1.Workflow) (workflow *WorkflowExecution) {
manifest, err := json.Marshal(wf)
if err != nil {
return
}
workflow = &WorkflowExecution{
UID: string(wf.UID),
CreatedAt: wf.CreationTimestamp.UTC(),
Name: wf.Name,
Manifest: string(manifest),
}
return
}
func UnmarshalWorkflows(wfBytes []byte, strict bool) (wfs []wfv1.Workflow, err error) {
var wf wfv1.Workflow
var jsonOpts []argojson.JSONOpt
if strict {
jsonOpts = append(jsonOpts, argojson.DisallowUnknownFields)
}
wfBytes, err = filterOutCustomTypesFromManifest(wfBytes)
if err != nil {
return
}
err = argojson.Unmarshal(wfBytes, &wf, jsonOpts...)
if err == nil {
return []wfv1.Workflow{wf}, nil
}
wfs, err = common.SplitWorkflowYAMLFile(wfBytes, strict)
if err == nil {
return
}
return
}
func (c *Client) injectAutomatedFields(namespace string, wf *wfv1.Workflow, opts *WorkflowExecutionOptions) (err error) {
if opts.PodGCStrategy == nil {
if wf.Spec.PodGC == nil {
//TODO - Load this data from onepanel config-map or secret
podGCStrategy := env.GetEnv("ARGO_POD_GC_STRATEGY", "OnPodCompletion")
strategy := PodGCStrategy(podGCStrategy)
wf.Spec.PodGC = &wfv1.PodGC{
Strategy: strategy,
}
}
} else {
wf.Spec.PodGC = &wfv1.PodGC{
Strategy: *opts.PodGCStrategy,
}
}
addSecretValsToTemplate := true
secret, err := c.GetSecret(namespace, "onepanel-default-env")
if err != nil {
var statusError *k8serrors.StatusError
if errors.As(err, &statusError) {
if statusError.ErrStatus.Reason == "NotFound" {
addSecretValsToTemplate = false
} else {
return err
}
} else {
return err
}
}
// Create dev/shm volume
wf.Spec.Volumes = append(wf.Spec.Volumes, corev1.Volume{
Name: "sys-dshm",
VolumeSource: corev1.VolumeSource{
EmptyDir: &corev1.EmptyDirVolumeSource{
Medium: corev1.StorageMediumMemory,
},
},
})
for i, template := range wf.Spec.Templates {
// Do not inject Istio sidecars in workflows
if template.Metadata.Annotations == nil {
wf.Spec.Templates[i].Metadata.Annotations = make(map[string]string)
}
wf.Spec.Templates[i].Metadata.Annotations["sidecar.istio.io/inject"] = "false"
if template.Container == nil {
continue
}
// Mount dev/shm
wf.Spec.Templates[i].Container.VolumeMounts = append(template.Container.VolumeMounts, corev1.VolumeMount{
Name: "sys-dshm",
MountPath: "/dev/shm",
})
// Always add output artifacts for metrics but make them optional
wf.Spec.Templates[i].Outputs.Artifacts = append(template.Outputs.Artifacts, wfv1.Artifact{
Name: "sys-metrics",
Path: "/tmp/sys-metrics.json",
Optional: true,
Archive: &wfv1.ArchiveStrategy{
None: &wfv1.NoneStrategy{},
},
})
if !addSecretValsToTemplate {
continue
}
//Generate ENV vars from secret, if there is a container present in the workflow
//Get template ENV vars, avoid over-writing them with secret values
for key, value := range secret.Data {
decodedValue, errDecode := base64.StdEncoding.DecodeString(value)
if errDecode != nil {
return errDecode
}
addEnvToTemplate(&template, key, string(decodedValue))
}
sysConfig, sysErr := c.GetSystemConfig()
if sysErr != nil {
return sysErr
}
addEnvToTemplate(&template, "ONEPANEL_API_URL", sysConfig["ONEPANEL_API_URL"])
addEnvToTemplate(&template, "ONEPANEL_FQDN", sysConfig["ONEPANEL_FQDN"])
addEnvToTemplate(&template, "ONEPANEL_DOMAIN", sysConfig["ONEPANEL_DOMAIN"])
addEnvToTemplate(&template, "PROVIDER_TYPE", sysConfig["PROVIDER_TYPE"])
}
return
}
func addEnvToTemplate(template *wfv1.Template, key string, value string) {
//Flag to prevent over-writing user's envs
overwriteUserEnv := true
for _, templateEnv := range template.Container.Env {
if templateEnv.Name == key {
overwriteUserEnv = false
break
}
}
if overwriteUserEnv {
template.Container.Env = append(template.Container.Env, corev1.EnvVar{
Name: key,
Value: value,
})
}
}
func (c *Client) createWorkflow(namespace string, workflowTemplateId *uint64, wf *wfv1.Workflow, opts *WorkflowExecutionOptions) (createdWorkflow *wfv1.Workflow, err error) {
if opts == nil {
opts = &WorkflowExecutionOptions{}
}
if opts.Name != "" {
wf.ObjectMeta.Name = opts.Name
}
if opts.GenerateName != "" {
wf.ObjectMeta.GenerateName = opts.GenerateName
}
if opts.Entrypoint != "" {
wf.Spec.Entrypoint = opts.Entrypoint
}
if opts.ServiceAccount != "" {
wf.Spec.ServiceAccountName = opts.ServiceAccount
}
if len(opts.Parameters) > 0 {
newParams := make([]wfv1.Parameter, 0)
passedParams := make(map[string]bool)
for _, param := range opts.Parameters {
newParams = append(newParams, wfv1.Parameter{
Name: param.Name,
Value: param.Value,
})
passedParams[param.Name] = true
}
for _, param := range wf.Spec.Arguments.Parameters {
if _, ok := passedParams[param.Name]; ok {
// this parameter was overridden via command line
continue
}
newParams = append(newParams, param)
}
wf.Spec.Arguments.Parameters = newParams
}
if opts.Labels != nil {
wf.ObjectMeta.Labels = *opts.Labels
}
err = injectExitHandlerWorkflowExecutionStatistic(wf, namespace, workflowTemplateId)
if err != nil {
return nil, err
}
if err = c.injectAutomatedFields(namespace, wf, opts); err != nil {
return nil, err
}
createdWorkflow, err = c.ArgoprojV1alpha1().Workflows(namespace).Create(wf)
if err != nil {
return nil, err
}
//Create an entry for workflow_executions statistic
//CURL code will hit the API endpoint that will update the db row
err = c.InsertPreWorkflowExecutionStatistic(namespace, createdWorkflow.Name, int64(*workflowTemplateId), time.Now())
if err != nil {
return nil, err
}
return
}
func (c *Client) ValidateWorkflowExecution(namespace string, manifest []byte) (err error) {
manifest, err = filterOutCustomTypesFromManifest(manifest)
if err != nil {
return
}
workflows, err := UnmarshalWorkflows(manifest, true)
if err != nil {
return
}
wftmplGetter := templateresolution.WrapWorkflowTemplateInterface(c.ArgoprojV1alpha1().WorkflowTemplates(namespace))
for _, wf := range workflows {
c.injectAutomatedFields(namespace, &wf, &WorkflowExecutionOptions{})
_, err = validate.ValidateWorkflow(wftmplGetter, &wf, validate.ValidateOpts{})
if err != nil {
return
}
// Check that entrypoint and onExit templates are DAGs
for _, t := range wf.Spec.Templates {
if t.Name == wf.Spec.Entrypoint && t.DAG == nil {
return errors.New("\"entrypoint\" template should be a DAG")
}
if wf.Spec.OnExit != "" && t.Name == wf.Spec.OnExit && t.DAG == nil {
return errors.New("\"onExit\" template should be a DAG")
}
}
}
return
}
func (c *Client) CreateWorkflowExecution(namespace string, workflow *WorkflowExecution) (*WorkflowExecution, error) {
workflowTemplate, err := c.GetWorkflowTemplate(namespace, workflow.WorkflowTemplate.UID, workflow.WorkflowTemplate.Version)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Workflow": workflow,
"Error": err.Error(),
}).Error("Error with getting workflow template.")
return nil, util.NewUserError(codes.NotFound, "Error with getting workflow template.")
}
// TODO: Need to pull system parameters from k8s config/secret here, example: HOST
opts := &WorkflowExecutionOptions{}
re, _ := regexp.Compile(`[^a-zA-Z0-9-]{1,}`)
opts.GenerateName = strings.ToLower(re.ReplaceAllString(workflowTemplate.Name, `-`)) + "-"
for _, param := range workflow.Parameters {
opts.Parameters = append(opts.Parameters, WorkflowExecutionParameter{
Name: param.Name,
Value: param.Value,
})
}
if opts.Labels == nil {
opts.Labels = &map[string]string{}
}
(*opts.Labels)[workflowTemplateUIDLabelKey] = workflowTemplate.UID
(*opts.Labels)[workflowTemplateVersionLabelKey] = fmt.Sprint(workflowTemplate.Version)
label.MergeLabelsPrefix(*opts.Labels, workflow.Labels, label.TagPrefix)
//UX will prevent multiple workflows
manifest, err := workflowTemplate.GetWorkflowManifestBytes()
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"WorkflowTemplate": workflowTemplate,
"Error": err.Error(),
}).Error("Error with getting WorkflowManifest from workflow template")
return nil, err
}
workflows, err := UnmarshalWorkflows(manifest, true)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Workflow": workflow,
"Error": err.Error(),
}).Error("Error parsing workflow.")
return nil, err
}
var createdWorkflows []*wfv1.Workflow
for _, wf := range workflows {
createdWorkflow, err := c.createWorkflow(namespace, &workflowTemplate.ID, &wf, opts)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Workflow": workflow,
"Error": err.Error(),
}).Error("Error parsing workflow.")
return nil, err
}
createdWorkflows = append(createdWorkflows, createdWorkflow)
}
if createdWorkflows == nil {
err = errors.New("unable to create workflow")
log.WithFields(log.Fields{
"Namespace": namespace,
"WorkflowTemplate": workflowTemplate,
"Error": err.Error(),
}).Error("Error parsing workflow.")
return nil, err
}
workflow.Name = createdWorkflows[0].Name
workflow.CreatedAt = createdWorkflows[0].CreationTimestamp.UTC()
workflow.UID = string(createdWorkflows[0].ObjectMeta.UID)
workflow.WorkflowTemplate = workflowTemplate
// Manifests could get big, don't return them in this case.
workflow.WorkflowTemplate.Manifest = ""
return workflow, nil
}
func (c *Client) InsertPreWorkflowExecutionStatistic(namespace, name string, workflowTemplateID int64, createdAt time.Time) error {
tx, err := c.DB.Begin()
if err != nil {
return err
}
defer tx.Rollback()
insertMap := sq.Eq{
"workflow_template_id": workflowTemplateID,
"name": name,
"namespace": namespace,
"created_at": createdAt.UTC(),
}
_, err = sb.Insert("workflow_executions").
SetMap(insertMap).RunWith(tx).Exec()
if err != nil {
return err
}
err = tx.Commit()
if err != nil {
return err
}
return err
}
func (c *Client) FinishWorkflowExecutionStatisticViaExitHandler(namespace, name string, workflowTemplateID int64, workflowOutcomeIsSuccess bool) (err error) {
tx, err := c.DB.Begin()
if err != nil {
return err
}
defer tx.Rollback()
updateMap := sq.Eq{
"workflow_template_id": workflowTemplateID,
"name": name,
"namespace": namespace,
}
if workflowOutcomeIsSuccess {
updateMap["finished_at"] = time.Now().UTC()
} else {
updateMap["failed_at"] = time.Now().UTC()
}
_, err = sb.Update("workflow_executions").
SetMap(updateMap).Where(sq.Eq{"name": name}).RunWith(tx).Exec()
if err != nil {
return err
}
err = tx.Commit()
if err != nil {
return err
}
return err
}
func (c *Client) CronStartWorkflowExecutionStatisticInsert(namespace, name string, workflowTemplateID int64) (err error) {
tx, err := c.DB.Begin()
if err != nil {
return err
}
defer tx.Rollback()
insertMap := sq.Eq{
"workflow_template_id": workflowTemplateID,
"name": name,
"namespace": namespace,
"created_at": time.Now().UTC(),
}
_, err = sb.Insert("workflow_executions").
SetMap(insertMap).RunWith(tx).Exec()
if err != nil {
return err
}
err = tx.Commit()
if err != nil {
return err
}
return err
}
func (c *Client) GetWorkflowExecution(namespace, name string) (workflow *WorkflowExecution, err error) {
wf, err := c.ArgoprojV1alpha1().Workflows(namespace).Get(name, metav1.GetOptions{})
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Error": err.Error(),
}).Error("Workflow not found.")
return nil, util.NewUserError(codes.NotFound, "Workflow not found.")
}
uid := wf.ObjectMeta.Labels[workflowTemplateUIDLabelKey]
version, err := strconv.ParseInt(
wf.ObjectMeta.Labels[workflowTemplateVersionLabelKey],
10,
32,
)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Error": err.Error(),
}).Error("Invalid version number.")
return nil, util.NewUserError(codes.InvalidArgument, "Invalid version number.")
}
workflowTemplate, err := c.GetWorkflowTemplate(namespace, uid, version)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Error": err.Error(),
}).Error("Cannot get Workflow Template.")
return nil, util.NewUserError(codes.NotFound, "Cannot get Workflow Template.")
}
// TODO: Do we need to parse parameters into workflow.Parameters?
manifest, err := json.Marshal(wf)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Error": err.Error(),
}).Error("Invalid status.")
return nil, util.NewUserError(codes.InvalidArgument, "Invalid status.")
}
workflow = &WorkflowExecution{
UID: string(wf.UID),
CreatedAt: wf.CreationTimestamp.UTC(),
Name: wf.Name,
Phase: WorkflowExecutionPhase(wf.Status.Phase),
StartedAt: wf.Status.StartedAt.UTC(),
FinishedAt: wf.Status.FinishedAt.UTC(),
Manifest: string(manifest),
WorkflowTemplate: workflowTemplate,
}
return
}
func (c *Client) ListWorkflowExecutions(namespace, workflowTemplateUID, workflowTemplateVersion string) (workflows []*WorkflowExecution, err error) {
opts := &WorkflowExecutionOptions{}
if workflowTemplateUID != "" {
labelSelect := fmt.Sprintf("%s=%s", workflowTemplateUIDLabelKey, workflowTemplateUID)
if workflowTemplateVersion != "" {
labelSelect = fmt.Sprintf("%s,%s=%s", labelSelect, workflowTemplateVersionLabelKey, workflowTemplateVersion)
}
opts.ListOptions = &ListOptions{
LabelSelector: labelSelect,
}
}
workflowList, err := c.ArgoprojV1alpha1().Workflows(namespace).List(*opts.ListOptions)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"WorkflowTemplateUID": workflowTemplateUID,
"WorkflowTemplateVersion": workflowTemplateVersion,
"Error": err.Error(),
}).Error("Workflows not found.")
return nil, util.NewUserError(codes.NotFound, "Workflows not found.")
}
wfs := workflowList.Items
sort.Slice(wfs, func(i, j int) bool {
ith := wfs[i].CreationTimestamp.Time
jth := wfs[j].CreationTimestamp.Time
//Most recent first
return ith.After(jth)
})
for _, wf := range wfs {
execution := &WorkflowExecution{
Name: wf.ObjectMeta.Name,
UID: string(wf.ObjectMeta.UID),
Phase: WorkflowExecutionPhase(wf.Status.Phase),
StartedAt: wf.Status.StartedAt.UTC(),
FinishedAt: wf.Status.FinishedAt.UTC(),
CreatedAt: wf.CreationTimestamp.UTC(),
}
versionString, ok := wf.Labels[workflowTemplateVersionLabelKey]
if ok {
versionNumber, err := strconv.ParseInt(versionString, 10, 64)
if err == nil {
execution.WorkflowTemplate = &WorkflowTemplate{
Version: versionNumber,
}
} else {
log.WithFields(log.Fields{
"Namespace": namespace,
"WorkflowTemplateUID": workflowTemplateUID,
"WorkflowExecutionUID": wf.UID,
"Error": "Unable to get workflow template version",
}).Error("Unable to get workflow template version")
}
}
workflows = append(workflows, execution)
}
return
}
func (c *Client) WatchWorkflowExecution(namespace, name string) (<-chan *WorkflowExecution, error) {
_, err := c.GetWorkflowExecution(namespace, name)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Error": err.Error(),
}).Error("Workflow template not found.")
return nil, util.NewUserError(codes.NotFound, "Workflow not found.")
}
fieldSelector, _ := fields.ParseSelector(fmt.Sprintf("metadata.name=%s", name))
watcher, err := c.ArgoprojV1alpha1().Workflows(namespace).Watch(metav1.ListOptions{
FieldSelector: fieldSelector.String(),
})
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Error": err.Error(),
}).Error("Watch Workflow error.")
return nil, util.NewUserError(codes.Unknown, "Error with watching workflow.")
}
workflowWatcher := make(chan *WorkflowExecution)
ticker := time.NewTicker(time.Second)
go func() {
var workflow *wfv1.Workflow
ok := true
for {
select {
case next := <-watcher.ResultChan():
workflow, ok = next.Object.(*wfv1.Workflow)
case <-ticker.C:
}
if workflow == nil && ok {
continue
}
if workflow == nil && !ok {
workflow, err = c.ArgoprojV1alpha1().Workflows(namespace).Get(name, metav1.GetOptions{})
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Workflow": workflow,
"Error": err.Error(),
}).Error("Unable to get workflow.")
break
}
if workflow == nil {
break
}
}
manifest, err := json.Marshal(workflow)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Workflow": workflow,
"Error": err.Error(),
}).Error("Error with trying to JSON Marshal workflow.Status.")
break
}
workflowWatcher <- &WorkflowExecution{
CreatedAt: workflow.CreationTimestamp.UTC(),
StartedAt: workflow.Status.StartedAt.UTC(),
FinishedAt: workflow.Status.FinishedAt.UTC(),
UID: string(workflow.UID),
Name: workflow.Name,
Manifest: string(manifest),
}
if !workflow.Status.FinishedAt.IsZero() || !ok {
break
}
}
close(workflowWatcher)
watcher.Stop()
ticker.Stop()
}()
return workflowWatcher, nil
}
func (c *Client) GetWorkflowExecutionLogs(namespace, name, podName, containerName string) (<-chan *LogEntry, error) {
wf, err := c.ArgoprojV1alpha1().Workflows(namespace).Get(name, metav1.GetOptions{})
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"PodName": podName,
"ContainerName": containerName,
"Error": err.Error(),
}).Error("Workflow not found.")
return nil, util.NewUserError(codes.NotFound, "Workflow not found.")
}
var (
stream io.ReadCloser
s3Client *s3.Client
config map[string]string
endOffset int
)
if wf.Status.Nodes[podName].Completed() {
config, err = c.GetNamespaceConfig(namespace)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"PodName": podName,
"ContainerName": containerName,
"Error": err.Error(),
}).Error("Can't get configuration.")
return nil, util.NewUserError(codes.PermissionDenied, "Can't get configuration.")
}
s3Client, err = c.GetS3Client(namespace, config)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"PodName": podName,
"ContainerName": containerName,
"Error": err.Error(),
}).Error("Can't connect to S3 storage.")
return nil, util.NewUserError(codes.PermissionDenied, "Can't connect to S3 storage.")
}
opts := s3.GetObjectOptions{}
endOffset, err = strconv.Atoi(readEndOffset)
if err != nil {
return nil, util.NewUserError(codes.InvalidArgument, "Invaild range.")
}
opts.SetRange(0, int64(endOffset))
stream, err = s3Client.GetObject(config[artifactRepositoryBucketKey], "artifacts/"+namespace+"/"+name+"/"+podName+"/"+containerName+".log", opts)
} else {
stream, err = c.CoreV1().Pods(namespace).GetLogs(podName, &corev1.PodLogOptions{
Container: containerName,
Follow: true,
Timestamps: true,
}).Stream()
}
// TODO: Catch exact kubernetes error
//Todo: Can above todo be removed with the logging error?
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"PodName": podName,
"ContainerName": containerName,
"Error": err.Error(),
}).Error("Error with logs.")
return nil, util.NewUserError(codes.NotFound, "Log not found.")
}
logWatcher := make(chan *LogEntry)
go func() {
scanner := bufio.NewScanner(stream)
for scanner.Scan() {
text := scanner.Text()
parts := strings.Split(text, " ")
timestamp, err := time.Parse(time.RFC3339, parts[0])
if err != nil {
logWatcher <- &LogEntry{Content: text}
} else {
logWatcher <- &LogEntry{
Timestamp: timestamp,
Content: strings.Join(parts[1:], " "),
}
}
}
close(logWatcher)
}()
return logWatcher, err
}
func (c *Client) GetWorkflowExecutionMetrics(namespace, name, podName string) (metrics []*Metric, err error) {
_, err = c.GetWorkflowExecution(namespace, name)
if err != nil {
return nil, util.NewUserError(codes.NotFound, "Workflow not found.")
}
var (
stream io.ReadCloser
s3Client *s3.Client
config map[string]string
)
config, err = c.GetNamespaceConfig(namespace)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"PodName": podName,
"Error": err.Error(),
}).Error("Can't get configuration.")
return nil, util.NewUserError(codes.PermissionDenied, "Can't get configuration.")
}
s3Client, err = c.GetS3Client(namespace, config)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"PodName": podName,
"Error": err.Error(),
}).Error("Can't connect to S3 storage.")
return nil, util.NewUserError(codes.PermissionDenied, "Can't connect to S3 storage.")
}
opts := s3.GetObjectOptions{}
stream, err = s3Client.GetObject(config[artifactRepositoryBucketKey], "artifacts/"+namespace+"/"+name+"/"+podName+"/sys-metrics.json", opts)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"PodName": podName,
"Error": err.Error(),
}).Error("Metrics do not exist.")
return nil, util.NewUserError(codes.NotFound, "Metrics do not exist.")
}
content, err := ioutil.ReadAll(stream)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"PodName": podName,
"Error": err.Error(),
}).Error("Unknown.")
if strings.Contains("The specified key does not exist.", err.Error()) {
return nil, util.NewUserError(codes.NotFound, "Metrics were not found.")
}
return nil, util.NewUserError(codes.Unknown, "Unknown error.")
}
if err = json.Unmarshal(content, &metrics); err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"PodName": podName,
"Error": err.Error(),
}).Error("Error parsing metrics.")
return nil, util.NewUserError(codes.InvalidArgument, "Error parsing metrics.")
}
return
}
func (c *Client) RetryWorkflowExecution(namespace, name string) (workflow *WorkflowExecution, err error) {
wf, err := c.ArgoprojV1alpha1().Workflows(namespace).Get(name, metav1.GetOptions{})
if err != nil {
return
}
wf, err = argoutil.RetryWorkflow(c, c.ArgoprojV1alpha1().Workflows(namespace), wf)
workflow = typeWorkflow(wf)
return
}
func (c *Client) ResubmitWorkflowExecution(namespace, name string) (workflow *WorkflowExecution, err error) {
wf, err := c.ArgoprojV1alpha1().Workflows(namespace).Get(name, metav1.GetOptions{})
if err != nil {
return
}
wf, err = argoutil.FormulateResubmitWorkflow(wf, false)
if err != nil {
return
}
wf, err = argoutil.SubmitWorkflow(c.ArgoprojV1alpha1().Workflows(namespace), c, namespace, wf, &argoutil.SubmitOpts{})
if err != nil {
return
}
workflow = typeWorkflow(wf)
return
}
func (c *Client) ResumeWorkflowExecution(namespace, name string) (workflow *WorkflowExecution, err error) {
err = argoutil.ResumeWorkflow(c.ArgoprojV1alpha1().Workflows(namespace), name, "")
if err != nil {
return
}
wf, err := c.ArgoprojV1alpha1().Workflows(namespace).Get(name, metav1.GetOptions{})
workflow = typeWorkflow(wf)
return
}
func (c *Client) SuspendWorkflowExecution(namespace, name string) (err error) {
err = argoutil.SuspendWorkflow(c.ArgoprojV1alpha1().Workflows(namespace), name)
return
}
func (c *Client) TerminateWorkflowExecution(namespace, name string) (err error) {
err = argoutil.TerminateWorkflow(c.ArgoprojV1alpha1().Workflows(namespace), name)
return
}
func (c *Client) GetArtifact(namespace, name, key string) (data []byte, err error) {
config, err := c.GetNamespaceConfig(namespace)
if err != nil {
return
}
s3Client, err := c.GetS3Client(namespace, config)
if err != nil {
return
}
opts := s3.GetObjectOptions{}
stream, err := s3Client.GetObject(config[artifactRepositoryBucketKey], key, opts)
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Key": key,
"Error": err.Error(),
}).Error("Metrics do not exist.")
return
}
data, err = ioutil.ReadAll(stream)
if err != nil {
return
}
return
}
func (c *Client) ListFiles(namespace, key string) (files []*File, err error) {
config, err := c.GetNamespaceConfig(namespace)
if err != nil {
return
}
s3Client, err := c.GetS3Client(namespace, config)
if err != nil {
return
}
files = make([]*File, 0)
if len(key) > 0 {
if string(key[len(key)-1]) != "/" {
key += "/"
}
}
doneCh := make(chan struct{})
defer close(doneCh)
for objInfo := range s3Client.ListObjectsV2(config[artifactRepositoryBucketKey], key, false, doneCh) {
if objInfo.Key == key {
continue
}
isDirectory := (objInfo.ETag == "" || strings.HasSuffix(objInfo.Key, "/")) && objInfo.Size == 0
newFile := &File{
Path: objInfo.Key,
Name: FilePathToName(objInfo.Key),
Extension: FilePathToExtension(objInfo.Key),
Size: objInfo.Size,
LastModified: objInfo.LastModified,
ContentType: objInfo.ContentType,
Directory: isDirectory,
}
files = append(files, newFile)
}
return
}
func filterOutCustomTypesFromManifest(manifest []byte) (result []byte, err error) {
data := make(map[string]interface{})
err = yaml.Unmarshal(manifest, &data)
if err != nil {
return
}
spec, ok := data["spec"]
if !ok {
return manifest, nil
}
specMap, ok := spec.(map[string]interface{})
if !ok {
return manifest, nil
}
arguments, ok := specMap["arguments"]
if !ok {
return manifest, nil
}
argumentsMap, ok := arguments.(map[string]interface{})
if !ok {
return manifest, nil
}
parameters, ok := argumentsMap["parameters"]
if !ok {
return manifest, nil
}
parametersList, ok := parameters.([]interface{})
if !ok {
return manifest, nil
}
// We might not want some parameters due to data structuring.
parametersToKeep := make([]interface{}, 0)
for _, parameter := range parametersList {
paramMap, ok := parameter.(map[string]interface{})
if !ok {
continue
}
// If the parameter does not have a value, skip it so argo doesn't try to process it and fail.
if _, hasValue := paramMap["value"]; !hasValue {
continue
}
parametersToKeep = append(parametersToKeep, parameter)
keysToDelete := make([]string, 0)
for key := range paramMap {
if key != "name" && key != "value" {
keysToDelete = append(keysToDelete, key)
}
}
for _, key := range keysToDelete {
delete(paramMap, key)
}
}
argumentsMap["parameters"] = parametersToKeep
return yaml.Marshal(data)
}
// prefix is the label prefix.
// e.g. prefix/my-label-key: my-label-value
func (c *Client) GetWorkflowExecutionLabels(namespace, name, prefix string) (labels map[string]string, err error) {
wf, err := c.ArgoprojV1alpha1().Workflows(namespace).Get(name, metav1.GetOptions{})
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Error": err.Error(),
}).Error("Workflow not found.")
return nil, util.NewUserError(codes.NotFound, "Workflow not found.")
}
labels = label.FilterByPrefix(prefix, wf.Labels)
labels = label.RemovePrefix(prefix, labels)
return
}
func (c *Client) DeleteWorkflowExecutionLabel(namespace, name string, keysToDelete ...string) (labels map[string]string, err error) {
wf, err := c.ArgoprojV1alpha1().Workflows(namespace).Get(name, metav1.GetOptions{})
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Error": err.Error(),
}).Error("Workflow not found.")
return nil, util.NewUserError(codes.NotFound, "Workflow not found.")
}
label.Delete(wf.Labels, keysToDelete...)
return wf.Labels, nil
}
func (c *Client) DeleteWorkflowTemplateLabel(namespace, name string, keysToDelete ...string) (labels map[string]string, err error) {
wf, err := c.ArgoprojV1alpha1().WorkflowTemplates(namespace).Get(name, metav1.GetOptions{})
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Error": err.Error(),
}).Error("Workflow Template not found.")
return nil, util.NewUserError(codes.NotFound, "Workflow Template not found.")
}
label.Delete(wf.Labels, keysToDelete...)
return wf.Labels, nil
}
// prefix is the label prefix.
// we delete all labels with that prefix and set the new ones
// e.g. prefix/my-label-key: my-label-value
func (c *Client) SetWorkflowExecutionLabels(namespace, name, prefix string, keyValues map[string]string, deleteOld bool) (workflowLabels map[string]string, err error) {
wf, err := c.ArgoprojV1alpha1().Workflows(namespace).Get(name, metav1.GetOptions{})
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Error": err.Error(),
}).Error("Workflow not found.")
return nil, util.NewUserError(codes.NotFound, "Workflow not found.")
}
if deleteOld {
label.DeleteWithPrefix(wf.Labels, prefix)
}
label.MergeLabelsPrefix(wf.Labels, keyValues, prefix)
wf, err = c.ArgoprojV1alpha1().Workflows(namespace).Update(wf)
if err != nil {
return nil, err
}
filteredMap := label.FilterByPrefix(prefix, wf.Labels)
filteredMap = label.RemovePrefix(prefix, filteredMap)
return filteredMap, nil
}
// prefix is the label prefix.
// we delete all labels with that prefix and set the new ones
// e.g. prefix/my-label-key: my-label-value
func (c *Client) SetWorkflowTemplateLabels(namespace, name, prefix string, keyValues map[string]string, deleteOld bool) (workflowLabels map[string]string, err error) {
wf, err := c.getArgoWorkflowTemplate(namespace, name, "latest")
if err != nil {
log.WithFields(log.Fields{
"Namespace": namespace,
"Name": name,
"Error": err.Error(),
}).Error("Workflow Template not found.")
return nil, util.NewUserError(codes.NotFound, "Workflow Template not found.")
}
if deleteOld {
label.DeleteWithPrefix(wf.Labels, prefix)
}
if wf.Labels == nil {
wf.Labels = make(map[string]string)
}
label.MergeLabelsPrefix(wf.Labels, keyValues, prefix)
wf, err = c.ArgoprojV1alpha1().WorkflowTemplates(namespace).Update(wf)
if err != nil {
return nil, err
}
filteredMap := label.FilterByPrefix(prefix, wf.Labels)
filteredMap = label.RemovePrefix(prefix, filteredMap)
return filteredMap, nil
}
func (c *Client) GetWorkflowExecutionStatisticsForTemplates(workflowTemplates ...*WorkflowTemplate) (err error) {
if len(workflowTemplates) == 0 {
return errors.New("GetWorkflowExecutionStatisticsForTemplates requires at least 1 id")
}
tx, err := c.DB.Begin()
if err != nil {
return err
}
whereIn := "workflow_template_id IN (?"
for i := range workflowTemplates {
if i == 0 {
continue
}
whereIn += ",?"
}
whereIn += ")"
ids := make([]interface{}, len(workflowTemplates))
for i, workflowTemplate := range workflowTemplates {
ids[i] = workflowTemplate.ID
}
defer tx.Rollback()
statsSelect := `
workflow_template_id,
MAX(created_at) last_executed,
COUNT(*) FILTER (WHERE finished_At IS NULL AND failed_at IS NULL) running,
COUNT(*) FILTER (WHERE finished_at IS NOT NULL) completed,
COUNT(*) FILTER (WHERE failed_at IS NOT NULL) failed,
COUNT(*) total`
query, args, err := sb.Select(statsSelect).
From("workflow_executions").
Where(whereIn, ids...).
GroupBy("workflow_template_id").
ToSql()
if err != nil {
return err
}
result := make([]*WorkflowExecutionStatisticReport, 0)
err = c.DB.Select(&result, query, args...)
if err != nil {
return err
}
resultMapping := make(map[uint64]*WorkflowExecutionStatisticReport)
for i := range result {
report := result[i]
resultMapping[report.WorkflowTemplateId] = report
}
for _, workflowTemplate := range workflowTemplates {
resultMap, ok := resultMapping[workflowTemplate.ID]
if ok {
workflowTemplate.WorkflowExecutionStatisticReport = resultMap
}
}
return
}
/**
Will build a template that makes a CURL request to the onepanel-core API,
with statistics about the workflow that was just executed.
*/
func getWorkflowStatisticsExitHandlerTemplate(namespace string, workflowTemplateId *uint64) (statsTemplate *wfv1.Template, err error) {
host := env.GetEnv("ONEPANEL_CORE_SERVICE_HOST", "onepanel-core.onepanel.svc.cluster.local")
if host == "" {
err = errors.New("ONEPANEL_CORE_SERVICE_HOST is empty.")
return
}
port := env.GetEnv("ONEPANEL_CORE_SERVICE_PORT", "80")
if port == "" {
err = errors.New("ONEPANEL_CORE_SERVICE_PORT is empty.")
return
}
curlEndpoint := fmt.Sprintf("http://%s:%s/apis/v1beta1/%s/workflow_executions/{{workflow.name}}/statistics", host, port, namespace)
jsonRequestStruct := api.Statistics{
WorkflowStatus: "{{workflow.status}}",
WorkflowTemplateId: int64(*workflowTemplateId),
}
jsonRequestBytes, err := json.Marshal(jsonRequestStruct)
if err != nil {
return nil, err
}
jsonRequestStr := string(jsonRequestBytes)
curlJSONBody := fmt.Sprintf("--data '%s'", jsonRequestStr)
statsTemplate = &wfv1.Template{
Name: "sys-send-exit-stats",
Container: &corev1.Container{
Image: "curlimages/curl",
Command: []string{"sh", "-c"},
Args: []string{
"SERVICE_ACCOUNT_TOKEN=$(cat /var/run/secrets/kubernetes.io/serviceaccount/token) && curl -s -o /dev/null -w '%{http_code}' '" + curlEndpoint + "' -H \"Content-Type: application/json\" -H 'Connection: keep-alive' -H 'Accept: application/json' " +
"-H 'Authorization: Bearer '\"$SERVICE_ACCOUNT_TOKEN\"'' " +
curlJSONBody + " --compressed",
},
},
}
return
}
func getCronWorkflowInitContainerTemplate(namespace string, workflowTemplateId *uint64) (containerTemplate *wfv1.Template, err error) {
host := env.GetEnv("ONEPANEL_CORE_SERVICE_HOST", "onepanel-core.onepanel.svc.cluster.local")
if host == "" {
err = errors.New("ONEPANEL_CORE_SERVICE_HOST is empty.")
return
}
port := env.GetEnv("ONEPANEL_CORE_SERVICE_PORT", "80")
if port == "" {
err = errors.New("ONEPANEL_CORE_SERVICE_PORT is empty.")
return
}
curlEndpoint := fmt.Sprintf("http://%s:%s/apis/v1beta1/%s/workflow_executions/{{workflow.name}}/cron_start_statistics/%d", host, port, namespace, workflowTemplateId)
jsonRequestStruct := api.Statistics{
WorkflowStatus: "{{workflow.status}}",
WorkflowTemplateId: int64(*workflowTemplateId),
}
jsonRequestBytes, err := json.Marshal(jsonRequestStruct)
if err != nil {
return nil, err
}
jsonRequestStr := string(jsonRequestBytes)
curlJSONBody := fmt.Sprintf("--data '%s'", jsonRequestStr)
containerTemplate = &wfv1.Template{
Name: "sys-send-init-stats",
Container: &corev1.Container{
Name: "cron-init-container",
Image: "curlimages/curl",
Command: []string{"sh", "-c"},
Args: []string{
"SERVICE_ACCOUNT_TOKEN=$(cat /var/run/secrets/kubernetes.io/serviceaccount/token) && curl -s -o /dev/null -w '%{http_code}' '" + curlEndpoint + "' -H \"Content-Type: application/json\" -H 'Connection: keep-alive' -H 'Accept: application/json' " +
"-H 'Authorization: Bearer '\"$SERVICE_ACCOUNT_TOKEN\"'' " +
curlJSONBody + " --compressed",
},
}}
return
}
func injectExitHandlerWorkflowExecutionStatistic(wf *wfv1.Workflow, namespace string, workflowTemplateId *uint64) error {
statsTemplate, err := getWorkflowStatisticsExitHandlerTemplate(namespace, workflowTemplateId)
if err != nil {
return err
}
dagTask := wfv1.DAGTask{
Name: statsTemplate.Name,
Template: statsTemplate.Name,
}
wf.Spec.Templates = append(wf.Spec.Templates, *statsTemplate)
if wf.Spec.OnExit != "" {
for _, t := range wf.Spec.Templates {
if t.Name == wf.Spec.OnExit {
lasTaskIndex := len(t.DAG.Tasks) - 1
dagTask.Dependencies = []string{t.DAG.Tasks[lasTaskIndex].Name}
t.DAG.Tasks = append(t.DAG.Tasks, dagTask)
break
}
}
} else {
exitHandlerDAG := wfv1.Template{
Name: "exit-handler",
DAG: &wfv1.DAGTemplate{
Tasks: []wfv1.DAGTask{
dagTask,
},
},
}
wf.Spec.OnExit = "exit-handler"
wf.Spec.Templates = append(wf.Spec.Templates, exitHandlerDAG)
}
return nil
}
func injectInitHandlerWorkflowExecutionStatistic(wf *wfv1.Workflow, namespace string, workflowTemplateId *uint64) error {
containerTemplate, err := getCronWorkflowInitContainerTemplate(namespace, workflowTemplateId)
if err != nil {
return err
}
wf.Spec.Templates = append(wf.Spec.Templates, *containerTemplate)
for i, t := range wf.Spec.Templates {
if t.Name == wf.Spec.Entrypoint {
// DAG is always required for entrypoint templates
if t.DAG != nil {
for j, task := range t.DAG.Tasks {
if task.Dependencies == nil {
wf.Spec.Templates[i].DAG.Tasks[j].Dependencies = []string{containerTemplate.Name}
wf.Spec.Templates[i].DAG.Tasks = append(t.DAG.Tasks, wfv1.DAGTask{
Name: containerTemplate.Name,
Template: containerTemplate.Name,
})
}
}
}
break
}
}
return nil
}