gonum/graph/simple/dense_directed_matrix.go

// Copyright ©2014 The Gonum Authors. All rights reserved.
// Use of this source code is governed by a BSD-style
// license that can be found in the LICENSE file.

package simple

import (
	"sort"

	"gonum.org/v1/gonum/graph"
	"gonum.org/v1/gonum/graph/internal/ordered"
	"gonum.org/v1/gonum/graph/iterator"
	"gonum.org/v1/gonum/mat"
)

var (
	dm *DirectedMatrix

	_ graph.Graph        = dm
	_ graph.Directed     = dm
	_ edgeSetter         = dm
	_ weightedEdgeSetter = dm
)

// DirectedMatrix represents a directed graph using an adjacency
// matrix such that all IDs are in a contiguous block from 0 to n-1.
// Edges are stored implicitly as an edge weight, so edges stored in
// the graph are not recoverable.
type DirectedMatrix struct {
	mat   *mat.Dense
	nodes []graph.Node

	self   float64
	absent float64
}

// NewDirectedMatrix creates a directed dense graph with n nodes.
// All edges are initialized with the weight given by init. The self parameter
// specifies the cost of self connection, and absent specifies the weight
// returned for absent edges.
func NewDirectedMatrix(n int, init, self, absent float64) *DirectedMatrix {
	matrix := make([]float64, n*n)
	if init != 0 {
		for i := range matrix {
			matrix[i] = init
		}
	}
	for i := 0; i < len(matrix); i += n + 1 {
		matrix[i] = self
	}
	return &DirectedMatrix{
		mat:    mat.NewDense(n, n, matrix),
		self:   self,
		absent: absent,
	}
}

// NewDirectedMatrixFrom creates a directed dense graph with the given nodes.
// The IDs of the nodes must be contiguous from 0 to len(nodes)-1, but may
// be in any order. If IDs are not contiguous NewDirectedMatrixFrom will panic.
// All edges are initialized with the weight given by init. The self parameter
// specifies the cost of self connection, and absent specifies the weight
// returned for absent edges.
func NewDirectedMatrixFrom(nodes []graph.Node, init, self, absent float64) *DirectedMatrix {
	sort.Sort(ordered.ByID(nodes))
	for i, n := range nodes {
		if int64(i) != n.ID() {
			panic("simple: non-contiguous node IDs")
		}
	}
	g := NewDirectedMatrix(len(nodes), init, self, absent)
	g.nodes = nodes
	return g
}

// Edge returns the edge from u to v if such an edge exists and nil otherwise.
// The node v must be directly reachable from u as defined by the From method.
func (g *DirectedMatrix) Edge(uid, vid int64) graph.Edge {
	return g.WeightedEdge(uid, vid)
}

// Edges returns all the edges in the graph.
func (g *DirectedMatrix) Edges() graph.Edges {
	var edges []graph.Edge
	r, _ := g.mat.Dims()
	for i := 0; i < r; i++ {
		for j := 0; j < r; j++ {
			if i == j {
				continue
			}
			if w := g.mat.At(i, j); !isSame(w, g.absent) {
				edges = append(edges, WeightedEdge{F: g.Node(int64(i)), T: g.Node(int64(j)), W: w})
			}
		}
	}
	if len(edges) == 0 {
		return graph.Empty
	}
	return iterator.NewOrderedEdges(edges)
}

// From returns all nodes in g that can be reached directly from n.
func (g *DirectedMatrix) From(id int64) graph.Nodes {
	if !g.has(id) {
		return graph.Empty
	}
	var nodes []graph.Node
	_, c := g.mat.Dims()
	for j := 0; j < c; j++ {
		if int64(j) == id {
			continue
		}
		// id is not greater than maximum int by this point.
		if !isSame(g.mat.At(int(id), j), g.absent) {
			nodes = append(nodes, g.Node(int64(j)))
		}
	}
	if len(nodes) == 0 {
		return graph.Empty
	}
	return iterator.NewOrderedNodes(nodes)
}

// HasEdgeBetween returns whether an edge exists between nodes x and y without
// considering direction.
func (g *DirectedMatrix) HasEdgeBetween(xid, yid int64) bool {
	if !g.has(xid) {
		return false
	}
	if !g.has(yid) {
		return false
	}
	// xid and yid are not greater than maximum int by this point.
	return xid != yid && (!isSame(g.mat.At(int(xid), int(yid)), g.absent) || !isSame(g.mat.At(int(yid), int(xid)), g.absent))
}

// HasEdgeFromTo returns whether an edge exists in the graph from u to v.
func (g *DirectedMatrix) HasEdgeFromTo(uid, vid int64) bool {
	if !g.has(uid) {
		return false
	}
	if !g.has(vid) {
		return false
	}
	// uid and vid are not greater than maximum int by this point.
	return uid != vid && !isSame(g.mat.At(int(uid), int(vid)), g.absent)
}

// Matrix returns the mat.Matrix representation of the graph. The orientation
// of the matrix is such that the matrix entry at G_{ij} is the weight of the edge
// from node i to node j.
func (g *DirectedMatrix) Matrix() mat.Matrix {
	// Prevent alteration of dimensions of the returned matrix.
	m := *g.mat
	return &m
}

// Node returns the node with the given ID if it exists in the graph,
// and nil otherwise.
func (g *DirectedMatrix) Node(id int64) graph.Node {
	if !g.has(id) {
		return nil
	}
	if g.nodes == nil {
		return Node(id)
	}
	return g.nodes[id]
}

// Nodes returns all the nodes in the graph.
func (g *DirectedMatrix) Nodes() graph.Nodes {
	if g.nodes != nil {
		nodes := make([]graph.Node, len(g.nodes))
		copy(nodes, g.nodes)
		return iterator.NewOrderedNodes(nodes)
	}
	r, _ := g.mat.Dims()
	// Matrix graphs must have at least one node.
	return iterator.NewImplicitNodes(0, r, newSimpleNode)
}

// RemoveEdge removes the edge with the given end point nodes from the graph, leaving the terminal
// nodes. If the edge does not exist it is a no-op.
func (g *DirectedMatrix) RemoveEdge(fid, tid int64) {
	if !g.has(fid) {
		return
	}
	if !g.has(tid) {
		return
	}
	// fid and tid are not greater than maximum int by this point.
	g.mat.Set(int(fid), int(tid), g.absent)
}

// SetEdge sets e, an edge from one node to another with unit weight. If the ends of the edge
// are not in g or the edge is a self loop, SetEdge panics. SetEdge will store the nodes of
// e in the graph if it was initialized with NewDirectedMatrixFrom.
func (g *DirectedMatrix) SetEdge(e graph.Edge) {
	g.setWeightedEdge(e, 1)
}

// SetWeightedEdge sets e, an edge from one node to another. If the ends of the edge are not in g
// or the edge is a self loop, SetWeightedEdge panics. SetWeightedEdge will store the nodes of
// e in the graph if it was initialized with NewDirectedMatrixFrom.
func (g *DirectedMatrix) SetWeightedEdge(e graph.WeightedEdge) {
	g.setWeightedEdge(e, e.Weight())
}

func (g *DirectedMatrix) setWeightedEdge(e graph.Edge, weight float64) {
	from := e.From()
	fid := from.ID()
	to := e.To()
	tid := to.ID()
	if fid == tid {
		panic("simple: set illegal edge")
	}
	if int64(int(fid)) != fid {
		panic("simple: unavailable from node ID for dense graph")
	}
	if int64(int(tid)) != tid {
		panic("simple: unavailable to node ID for dense graph")
	}
	if g.nodes != nil {
		g.nodes[fid] = from
		g.nodes[tid] = to
	}
	// fid and tid are not greater than maximum int by this point.
	g.mat.Set(int(fid), int(tid), weight)
}

// To returns all nodes in g that can reach directly to n.
func (g *DirectedMatrix) To(id int64) graph.Nodes {
	if !g.has(id) {
		return graph.Empty
	}
	var nodes []graph.Node
	r, _ := g.mat.Dims()
	for i := 0; i < r; i++ {
		if int64(i) == id {
			continue
		}
		// id is not greater than maximum int by this point.
		if !isSame(g.mat.At(i, int(id)), g.absent) {
			nodes = append(nodes, g.Node(int64(i)))
		}
	}
	if len(nodes) == 0 {
		return graph.Empty
	}
	return iterator.NewOrderedNodes(nodes)
}

// Weight returns the weight for the edge between x and y if Edge(x, y) returns a non-nil Edge.
// If x and y are the same node or there is no joining edge between the two nodes the weight
// value returned is either the graph's absent or self value. Weight returns true if an edge
// exists between x and y or if x and y have the same ID, false otherwise.
func (g *DirectedMatrix) Weight(xid, yid int64) (w float64, ok bool) {
	if xid == yid {
		return g.self, true
	}
	if g.HasEdgeFromTo(xid, yid) {
		// xid and yid are not greater than maximum int by this point.
		return g.mat.At(int(xid), int(yid)), true
	}
	return g.absent, false
}

// WeightedEdge returns the weighted edge from u to v if such an edge exists and nil otherwise.
// The node v must be directly reachable from u as defined by the From method.
func (g *DirectedMatrix) WeightedEdge(uid, vid int64) graph.WeightedEdge {
	if g.HasEdgeFromTo(uid, vid) {
		// xid and yid are not greater than maximum int by this point.
		return WeightedEdge{F: g.Node(uid), T: g.Node(vid), W: g.mat.At(int(uid), int(vid))}
	}
	return nil
}

// WeightedEdges returns all the edges in the graph.
func (g *DirectedMatrix) WeightedEdges() graph.WeightedEdges {
	var edges []graph.WeightedEdge
	r, _ := g.mat.Dims()
	for i := 0; i < r; i++ {
		for j := 0; j < r; j++ {
			if i == j {
				continue
			}
			if w := g.mat.At(i, j); !isSame(w, g.absent) {
				edges = append(edges, WeightedEdge{F: g.Node(int64(i)), T: g.Node(int64(j)), W: w})
			}
		}
	}
	if len(edges) == 0 {
		return graph.Empty
	}
	return iterator.NewOrderedWeightedEdges(edges)
}

func (g *DirectedMatrix) has(id int64) bool {
	r, _ := g.mat.Dims()
	return 0 <= id && id < int64(r)
}