// Copyright ©2016 The Gonum Authors. All rights reserved. // Use of this source code is governed by a BSD-style // license that can be found in the LICENSE file. package community import ( "math/rand/v2" "testing" "gonum.org/v1/gonum/graph" "gonum.org/v1/gonum/graph/simple" ) func TestProfileUndirected(t *testing.T) { for _, test := range communityUndirectedQTests { g := simple.NewUndirectedGraph() for u, e := range test.g { // Add nodes that are not defined by an edge. if g.Node(int64(u)) == nil { g.AddNode(simple.Node(u)) } for v := range e { g.SetEdge(simple.Edge{F: simple.Node(u), T: simple.Node(v)}) } } testProfileUndirected(t, test, g) } } func TestProfileWeightedUndirected(t *testing.T) { for _, test := range communityUndirectedQTests { g := simple.NewWeightedUndirectedGraph(0, 0) for u, e := range test.g { // Add nodes that are not defined by an edge. if g.Node(int64(u)) == nil { g.AddNode(simple.Node(u)) } for v := range e { g.SetWeightedEdge(simple.WeightedEdge{F: simple.Node(u), T: simple.Node(v), W: 1}) } } testProfileUndirected(t, test, g) } } func testProfileUndirected(t *testing.T, test communityUndirectedQTest, g graph.Undirected) { fn := ModularScore(g, Weight, 10, rand.NewPCG(1, 1)) p, err := Profile(fn, true, 1e-3, 0.1, 10) if err != nil { t.Errorf("%s: unexpected error: %v", test.name, err) } const tries = 1000 for i, d := range p { var score float64 for i := 0; i < tries; i++ { score, _ = fn(d.Low) if score >= d.Score { break } } if score < d.Score { t.Errorf("%s: failed to recover low end score: got: %v want: %v", test.name, score, d.Score) } if i != 0 && d.Score >= p[i-1].Score { t.Errorf("%s: not monotonically decreasing: %v -> %v", test.name, p[i-1], d) } } } func TestProfileDirected(t *testing.T) { for _, test := range communityDirectedQTests { g := simple.NewDirectedGraph() for u, e := range test.g { // Add nodes that are not defined by an edge. if g.Node(int64(u)) == nil { g.AddNode(simple.Node(u)) } for v := range e { g.SetEdge(simple.Edge{F: simple.Node(u), T: simple.Node(v)}) } } testProfileDirected(t, test, g) } } func TestProfileWeightedDirected(t *testing.T) { for _, test := range communityDirectedQTests { g := simple.NewWeightedDirectedGraph(0, 0) for u, e := range test.g { // Add nodes that are not defined by an edge. if g.Node(int64(u)) == nil { g.AddNode(simple.Node(u)) } for v := range e { g.SetWeightedEdge(simple.WeightedEdge{F: simple.Node(u), T: simple.Node(v), W: 1}) } } testProfileDirected(t, test, g) } } func testProfileDirected(t *testing.T, test communityDirectedQTest, g graph.Directed) { fn := ModularScore(g, Weight, 10, rand.NewPCG(1, 1)) p, err := Profile(fn, true, 1e-3, 0.1, 10) if err != nil { t.Errorf("%s: unexpected error: %v", test.name, err) } const tries = 1000 for i, d := range p { var score float64 for i := 0; i < tries; i++ { score, _ = fn(d.Low) if score >= d.Score { break } } if score < d.Score { t.Errorf("%s: failed to recover low end score: got: %v want: %v", test.name, score, d.Score) } if i != 0 && d.Score >= p[i-1].Score { t.Errorf("%s: not monotonically decreasing: %v -> %v", test.name, p[i-1], d) } } } func TestProfileUndirectedMultiplex(t *testing.T) { for _, test := range communityUndirectedMultiplexQTests { g, weights, err := undirectedMultiplexFrom(test.layers) if err != nil { t.Errorf("unexpected error creating multiplex: %v", err) continue } const all = true fn := ModularMultiplexScore(g, weights, all, WeightMultiplex, 10, nil) p, err := Profile(fn, true, 1e-3, 0.1, 10) if err != nil { t.Errorf("%s: unexpected error: %v", test.name, err) } const tries = 1000 for i, d := range p { var score float64 for i := 0; i < tries; i++ { score, _ = fn(d.Low) if score >= d.Score { break } } if score < d.Score { t.Errorf("%s: failed to recover low end score: got: %v want: %v", test.name, score, d.Score) } if i != 0 && d.Score >= p[i-1].Score { t.Errorf("%s: not monotonically decreasing: %v -> %v", test.name, p[i-1], d) } } } } func TestProfileDirectedMultiplex(t *testing.T) { for _, test := range communityDirectedMultiplexQTests { g, weights, err := directedMultiplexFrom(test.layers) if err != nil { t.Errorf("unexpected error creating multiplex: %v", err) continue } const all = true fn := ModularMultiplexScore(g, weights, all, WeightMultiplex, 10, nil) p, err := Profile(fn, true, 1e-3, 0.1, 10) if err != nil { t.Errorf("%s: unexpected error: %v", test.name, err) } const tries = 1000 for i, d := range p { var score float64 for i := 0; i < tries; i++ { score, _ = fn(d.Low) if score >= d.Score { break } } if score < d.Score { t.Errorf("%s: failed to recover low end score: got: %v want: %v", test.name, score, d.Score) } if i != 0 && d.Score >= p[i-1].Score { t.Errorf("%s: not monotonically decreasing: %v -> %v", test.name, p[i-1], d) } } } }