Commit Graph

50 Commits

Author SHA1 Message Date
Brendan Tracey
b545e3e77e optimize: Refactor gradient convergence and remove DefaultSettings (#772)
* optimize: Refactor gradient convergence and remove DefaultSettings

The current API design makes it easy to make a mistake in not using the DefaultSettings. This change makes the zero value of Settings do the 'right thing'. The remaining setting that is used by the DefaultSettings is to change the behavior of the GradientTolerance. This was necessary because gradient-based Local methods (BFGS, LBFGS, CG, etc.) typically _define_ convergence by the value of the gradient, while Global methods (CMAES, GuessAndCheck) are defined by _not_ converging when the gradient is small. The problem is to have two completely different default behaviors without knowing the Method. The solution is to treat a very small value of the gradient as a method-based convergence, in the same way that a small spread of data is a convergence of CMAES. Thus, the default behavior, from the perspective of Settings, is never to converge based on the gradient, but all of the Local methods will converge when a value close to the minimum is found. This default value is set to a very small value, such that users should not want a smaller value. A user can thus still set a (more reasonable) convergence value through settings.

Fixes 677.
2018-12-23 08:17:27 -05:00
Brendan Tracey
44a6721e0d optimize: make function converger an interface (#728)
* optimize: make function converger an interface

Fixes #488.
Updates #677.
2018-12-16 11:37:46 +01:00
Dan Kortschak
9d66d7e8f5 mat: rename NewDiagonal to NewDiagDense 2018-12-14 22:45:14 +10:30
Brendan Tracey
c395f0688f optimize: move global code to minimize (#724)
Fixes #482.
2018-12-05 18:18:39 +00:00
Brendan Tracey
7f00e25224 mat: Add Diagonal interface and DiagDense type (#594)
mat: Add Diagonal interface and DiagDense type

Fixes 592.
2018-10-04 21:05:13 +01:00
Dan Kortschak
70492dcef1 all: quieten vet for unkeyed composite literals in test code 2018-09-02 07:59:12 +09:30
Brendan Tracey
cebdade430 Remove InitMean from CmaEsChol and use the value passed to Minimize instead 2018-07-26 06:45:43 -06:00
Brendan Tracey
fd90faf24c Change Minimize to take in an initial X location 2018-07-26 06:45:43 -06:00
Brendan Tracey
6f6398b9ea Change Global to Minimize 2018-07-26 06:45:43 -06:00
Brendan Tracey
9c5a3cae0e Rename GlobalMethod to Method and GlobalTask to Task 2018-07-26 06:45:43 -06:00
Brendan Tracey
88ef6dbe25 Change DefaultSettings to DefaultSettingsLocal 2018-07-26 06:45:43 -06:00
Brendan Tracey
3dd933ac47 Change Method to localMethod.
Now that Local is gone, unexport the type.
2018-07-26 06:45:43 -06:00
Brendan Tracey
286f685bdb Change call to Local to call to Global (#553) 2018-07-18 17:04:18 -06:00
Brendan Tracey
c06c645ce2 Improve parameters when dimension of NelderMead is one. In particular… (#543)
* Improve parameters when dimension of NelderMead is one. In particular the shrink parameter is set to 0, which causes the algorithm to fail to converge.

Fixes #542.

* Add test for 1-D NelderMead
2018-07-18 12:18:43 -06:00
Brendan Tracey
2704973b50 optimize: Remove Local function (#538)
* optimize: Remove Local function

This change removes the Local function. In order to do so, this changes the previous LocalGlobal wrapper to LocalController to allow Local methods to be used as a Global optimizer. This adds methods to all of the Local methods in order to implement GlobalMethod, and changes the tests accordingly. The next commit will fix all of the names
2018-07-18 12:18:18 -06:00
Vladimir Chalupecky
e9e56344e3 all: fix capitalization of Gonum in copyright headers 2018-06-22 17:32:53 +02:00
Vladimir Chalupecky
b96df58db9 all: add missing copyright headers 2018-06-22 17:32:53 +02:00
Brendan Tracey
d56ca496c1 optimize: Change Settings to allow InitialLocation (#497)
* optimize: Change Settings to allow InitialLocation

This modifies Settings to allow specifying an initial location and properties of the function (value, gradient, etc.). This allows to work with local optimizers that are seeded with initial settings. This has two fields that must be specified, InitX and InitValues. Ideally this would only be one location, but the difficulty is that the default value of the function is 0. We either must require the user to specify it is set (in this case that InitValues is non-zero), or require the user to change the default value away if it is not set. The former seems much safer.
2018-06-06 09:11:04 -06:00
Brendan Tracey
3f7b30d06c Remove init location from FunctionConverge (#489) 2018-05-15 09:14:31 -06:00
Brendan Tracey
f402b0ae71 optimize: remove Local implementation and replace with a call to Global (#485)
* optimize: remove Local implementation and replace with a call to Global

This PR starts the process described in #482. It removes the existing Local implementation, replacing with a function that wraps Method to act as a GlobalMethod. This PR also adds a hack to fix an inconsistency with FunctionConverge between Global and Local (and a TODO to make it not a hack in the future)
2018-05-09 11:02:19 -06:00
Dan Kortschak
4eed5b6553 all: replace publicly facing *rand.Rand with rand.Source 2018-05-03 07:40:18 +09:30
Brendan Tracey
698d55ff6e optimize/lp: make simplex panic when there are more equality constrai… (#451)
* optimize/lp: make simplex panic when there are more equality constraints than variables
2018-04-05 13:30:52 -06:00
Brendan Tracey
f0b07f8621 optimize: add ListSearch for finding the optimum over a specific list… (#438)
* optimize: add ListSearch for finding the optimum over a specific list of values
2018-03-22 14:00:44 -06:00
Brendan Tracey
6477e52b65 optimize/convex/lp: fix Simplex when number of constraints is number … (#443)
* optimize/convex/lp: fix Simplex when number of constraints is number of variables

Fixes 441.
2018-03-16 09:04:06 -06:00
Brendan Tracey
996b88e8f8 optimize: completely overhaul Global (#352)
* optimize: completely overhaul Global

The previous implementation of Global was a minefield for incorrectly implementing global optimization methods. It was very difficult to correctly implement methods (both of the provided methods were incorrect), and the resulting code is very ugly. This commit switches to use channels to communicate, allowing a more clear ordering of concurrent code. This also enables better shutdown of methods.

In addition to the main fix of Global, this refactors the two Global methods to use the updated interface, and makes some small improvements that were previously not possible. In addition, there are some small cleanups of Local to better match between the two calls.

If anyone has been curious about what is meant by 'Don't communicate by sharing memory, share memory by communicating' this is it, and why.

* respond to PR comments

* make constants

* simplify termination logic

* optimize: simplify stats collection

* overhaul documentation and respond to PR comments

* implement PR requests

* clean up cmaes
2018-02-05 08:44:02 -07:00
kortschak
12944e05fb all: run gofmt -s 2017-12-15 09:57:09 +10:30
Brendan Tracey
6b603faff1 optimize/functions: Implement VSLE valley-shaped functions (#332)
* optimize/functions: Implement VSLE valley-shaped functions
2017-12-11 11:14:52 -07:00
Brendan Tracey
f465caccb0 optimize: Add CMA-ES Cholesky global optimization method (#276)
* optimize: Add CMA-ES Cholesky global optimization method
2017-11-25 21:17:26 -06:00
kortschak
fa0c5aa7bc all: use golang.org/x/exp/rand instead of math/rand 2017-11-17 11:52:34 +10:30
kortschak
805531d142 all: change capitalization of gonum in license header 2017-11-02 06:54:08 +10:30
Brendan Tracey
38fbc22caf optimize: Update documentation for Global and clean up usage of globa… (#265)
* optimize: Update documentation for Global and clean up usage of globalStatus
2017-10-17 09:15:41 -06:00
kortschak
862a4c5a4f mat: rename Vector->VecDense 2017-07-31 09:59:22 +09:30
kortschak
0f349255d4 README: update old repo READMEs 2017-07-10 07:03:44 +09:30
kortschak
8dc3a3df20 mat: move SolveCholesky* onto Cholesky 2017-07-06 13:49:14 +09:30
kortschak
7af70dd796 all: fix many go vet errors 2017-06-20 16:29:35 +09:30
kortschak
a1347c0243 all: fix spelling errors 2017-06-20 16:29:35 +09:30
Vladimir Chalupecky
985bce8af2 optimize/functions: use ++ and -- operators 2017-06-17 11:48:26 +02:00
Vladimir Chalupecky
a606d7a1eb optimize/functions: rename Schubert to Shubert 2017-06-17 11:48:26 +02:00
kortschak
33b5a66ba7 mat: remove View* methods 2017-06-17 06:45:53 +09:30
Brendan Tracey
9a50036ca1 Merge pull request #65 from gonum/redomat
matrix, all: combine matrix packages, change matrix to mat
2017-06-15 23:41:30 -06:00
Brendan Tracey
7a159c1266 Merge pull request #66 from gonum/vlsefuncs
optimize/functions: implement the many local minima functions in the …
2017-06-15 23:41:19 -06:00
Brendan Tracey
7a97baedff optimize/functions: implement the many local minima functions in the virtual library of simulation experiments 2017-06-15 20:42:22 -06:00
Brendan Tracey
9f4ea5ad20 optimize/functions: add BraninHoo test function 2017-06-14 11:21:41 -06:00
Brendan Tracey
0d639745f1 all: update packages from mat64 to mat.
This mostly changes package name and code, but also fixes a couple of name clashes with the new package names
2017-06-13 10:28:21 -06:00
Vladimir Chalupecky
49d4aa112a optimize: remove lint found by megacheck 2017-06-01 22:07:40 +02:00
Brendan Tracey
766d140e92 Add remaining canonical import paths 2017-05-25 21:01:46 -06:00
kortschak
37850ca814 all: add canonical imports 2017-05-25 16:07:18 +09:30
Brendan Tracey
e70111877f all: delete extra travis files 2017-05-23 00:03:46 -06:00
Brendan Tracey
d33397aa65 all: change import paths 2017-05-23 00:03:03 -06:00
Brendan Tracey
37c29d47e7 optimize: imported optimize as a subtree 2017-05-23 00:02:57 -06:00