all: fix spelling and typos

blas/gonum/gonum.go

@@ -15,7 +15,7 @@ import (
 type Implementation struct{}
 
 // [SD]gemm behavior constants. These are kept here to keep them out of the
-// way during single precision code genration.
+// way during single precision code generation.
 const (
 	blockSize   = 64 // b x b matrix
 	minParBlock = 4  // minimum number of blocks needed to go parallel

blas/gonum/level2float32.go

@@ -1556,7 +1556,7 @@ func (Implementation) Ssbmv(ul blas.Uplo, n, k int, alpha float32, a []float32,
 		return
 	}
 
-	// Casses where a has bands below the diagonal.
+	// Cases where a has bands below the diagonal.
 	if incX == 1 {
 		iy := ky
 		for i := 0; i < n; i++ {

blas/gonum/level2float64.go

@@ -1534,7 +1534,7 @@ func (Implementation) Dsbmv(ul blas.Uplo, n, k int, alpha float64, a []float64,
 		return
 	}
 
-	// Casses where a has bands below the diagonal.
+	// Cases where a has bands below the diagonal.
 	if incX == 1 {
 		iy := ky
 		for i := 0; i < n; i++ {

cmplxs/cmplxs.go

@@ -255,7 +255,7 @@ func EqualFunc(s1, s2 []complex128, f func(complex128, complex128) bool) bool {
 }
 
 // EqualLengths returns true when all of the slices have equal length,
-// and false otherwise. It also eturns true when there are no input slices.
+// and false otherwise. It also returns true when there are no input slices.
 func EqualLengths(slices ...[]complex128) bool {
 	// This length check is needed: http://play.golang.org/p/sdty6YiLhM
 	if len(slices) == 0 {

diff/fd/diff.go

@@ -87,7 +87,7 @@ var Central = Formula{
 	Step:       6e-6,
 }
 
-// Central2nd represents a secord-order accurate centered approximation
+// Central2nd represents a second-order accurate centered approximation
 // to the second derivative.
 var Central2nd = Formula{
 	Stencil:    []Point{{Loc: -1, Coeff: 1}, {Loc: 0, Coeff: -2}, {Loc: 1, Coeff: 1}},

graph/coloring/coloring.go

@@ -89,7 +89,7 @@ func DsaturExact(term Terminator, g graph.Undirected) (k int, colors map[int64]i
 	// Brélaz Dsatur coloring, using the result if the recurrence is
 	// cancelled.
 	// We also use the initial maximum clique as a starting point for
-	// the exact search. If there is more than one maxumum clique, we
+	// the exact search. If there is more than one maximum clique, we
 	// need to ensure that we pick the one that will lead us down the
 	// easiest branch of the search tree. This will be the maximum
 	// clique with the lowest degree into the remainder of the graph.
@@ -174,7 +174,7 @@ func (c dSaturColoring) uncolor(id int64) {
 	c.uncolored.Add(id)
 }
 
-// dSaturExact recursively searches for an exact mimimum vertex coloring of the
+// dSaturExact recursively searches for an exact minimum vertex coloring of the
 // full graph in cand. If no chromatic number lower than ub is found, colors is
 // returned as nil.
 func dSaturExact(term Terminator, selector *saturationDegree, cand dSaturColoring, k, ub int, best map[int64]int) (newK int, colors map[int64]int, err error) {

graph/community/k_communities.go

@@ -12,7 +12,7 @@ import (
 	"gonum.org/v1/gonum/graph/traverse"
 )
 
-// KCliqueCommunities returns the k-clique communties of the undirected graph g for
+// KCliqueCommunities returns the k-clique communities of the undirected graph g for
 // k greater than zero. The returned communities are identified by linkage via k-clique
 // adjacency, where adjacency is defined as having k-1 common nodes. KCliqueCommunities
 // returns a single component including the full set of nodes of g when k is 1,

graph/formats/cytoscapejs/cytoscapejs.go

@@ -44,7 +44,7 @@ const (
 )
 
 // Type returns the element type of the receiver. It returns an error if the Element Group
-// is invalid or does not match the Element Data, or if the Elelement Data is an incomplete
+// is invalid or does not match the Element Data, or if the Element Data is an incomplete
 // edge.
 func (e Element) Type() (ElemType, error) {
 	et := InvalidElement

graph/multi/weighted_undirected.go

@@ -30,7 +30,7 @@ var (
 
 // WeightedUndirectedGraph implements a generalized undirected graph.
 type WeightedUndirectedGraph struct {
-	// EdgeWEightFunc is used to provide
+	// EdgeWeightFunc is used to provide
 	// the WeightFunc function for WeightedEdge
 	// values returned by the graph.
 	// WeightFunc must accept a nil input.

graph/multigraph.go

@@ -177,7 +177,7 @@ type WeightedMultigraphBuilder interface {
 	WeightedLineAdder
 }
 
-// UndirectedMultgraphBuilder is an undirected multigraph builder.
+// UndirectedMultigraphBuilder is an undirected multigraph builder.
 type UndirectedMultigraphBuilder interface {
 	UndirectedMultigraph
 	MultigraphBuilder

graph/path/dijkstra.go

@@ -18,7 +18,7 @@ import (
 // If g is a graph.Graph, all nodes of the graph will be stored in the shortest-path
 // tree, otherwise only nodes reachable from u will be stored.
 //
-// The time complexity of DijkstrFrom is O(|E|.log|V|).
+// The time complexity of DijkstraFrom is O(|E|.log|V|).
 func DijkstraFrom(u graph.Node, g traverse.Graph) Shortest {
 	var path Shortest
 	if h, ok := g.(graph.Graph); ok {
@@ -91,7 +91,7 @@ func DijkstraFrom(u graph.Node, g traverse.Graph) Shortest {
 // If g is a graph.Graph, all nodes of the graph will be stored in the shortest-path
 // tree, otherwise only nodes reachable from u will be stored.
 //
-// The time complexity of DijkstrAllFrom is O(|E|.log|V|).
+// The time complexity of DijkstraAllFrom is O(|E|.log|V|).
 func DijkstraAllFrom(u graph.Node, g traverse.Graph) ShortestAlts {
 	var path ShortestAlts
 	if h, ok := g.(graph.Graph); ok {
@@ -161,7 +161,7 @@ func DijkstraAllFrom(u graph.Node, g traverse.Graph) ShortestAlts {
 // If the graph does not implement graph.Weighter, UniformCost is used.
 // DijkstraAllPaths will panic if g has a negative edge weight.
 //
-// The time complexity of DijkstrAllPaths is O(|V|.|E|+|V|^2.log|V|).
+// The time complexity of DijkstraAllPaths is O(|V|.|E|+|V|^2.log|V|).
 func DijkstraAllPaths(g graph.Graph) (paths AllShortest) {
 	paths = newAllShortest(graph.NodesOf(g.Nodes()), false)
 	dijkstraAllPaths(g, paths)

graph/path/internal/testgraphs/grid.go

@@ -16,8 +16,8 @@ import (
 
 const (
 	Closed  = '*' // Closed is the closed grid node representation.
-	Open    = '.' // Open is the open grid node repesentation.
+	Open    = '.' // Open is the open grid node representation.
-	Unknown = '?' // Unknown is the unknown grid node repesentation.
+	Unknown = '?' // Unknown is the unknown grid node representation.
 )
 
 // Grid is a 2D grid planar undirected graph.

graph/testgraph/testgraph.go

@@ -742,7 +742,7 @@ func EdgeExistence(t *testing.T, b Builder, reversedEdge bool) {
 
 // LineExistence tests the constructed graph for the ability to correctly
 // return the existence of lines within the graph. This is a check of the
-// Line methods of graph.MultiGraph, the EdgeBetween method of graph.Undirected
+// Line methods of graph.Multigraph, the EdgeBetween method of graph.Undirected
 // and the EdgeFromTo method of graph.Directed. LineExistence also checks
 // that the nodes and traversed edges exist within the graph, checking the
 // Node, Edge, EdgeBetween and HasEdgeBetween methods of graph.Graph, the

interp/interp.go

@@ -106,7 +106,7 @@ func (pl PiecewiseLinear) Predict(x float64) float64 {
 	return pl.ys[i] + pl.slopes[i]*(x-xI)
 }
 
-// PiecewiseConstant is a left-continous, piecewise constant
+// PiecewiseConstant is a left-continuous, piecewise constant
 // 1-dimensional interpolator.
 type PiecewiseConstant struct {
 	// Interpolated X values.

lapack/gonum/dgesvd.go

@@ -473,7 +473,7 @@ func (impl Implementation) Dgesvd(jobU, jobVT lapack.SVDJob, m, n int, a []float
 							work[itauq:], work[iwork:], lwork-iwork)
 						iwork = ie + n
 
-						// Perform bidiagonal QR iteration, compuing left singular
+						// Perform bidiagonal QR iteration, computing left singular
 						// vectors of R in work[ir:].
 						ok = impl.Dbdsqr(blas.Upper, n, 0, n, 0, s, work[ie:], work, 1,
 							work[ir:], ldworkr, work, 1, work[iwork:])

lapack/gonum/dgtsv.go

@@ -20,7 +20,7 @@ import "math"
 // On entry, b contains the n×nrhs right-hand side matrix B. On return, b will
 // be overwritten. If ok is true, it will be overwritten by the solution matrix X.
 //
-// Dgtsv returns whether the solution X has been successfuly computed.
+// Dgtsv returns whether the solution X has been successfully computed.
 func (impl Implementation) Dgtsv(n, nrhs int, dl, d, du []float64, b []float64, ldb int) (ok bool) {
 	switch {
 	case n < 0:

lapack/gonum/dorglq.go

@@ -62,7 +62,7 @@ func (impl Implementation) Dorglq(m, n, k int, a []float64, lda int, tau, work [
 	}
 
 	nbmin := 2 // Minimum block size
-	var nx int // Crossover size from blocked to unbloked code
+	var nx int // Crossover size from blocked to unblocked code
 	iws := m   // Length of work needed
 	var ldwork int
 	if 1 < nb && nb < k {
@@ -90,7 +90,7 @@ func (impl Implementation) Dorglq(m, n, k int, a []float64, lda int, tau, work [
 		}
 	}
 	if kk < m {
-		// Perform the operation on colums kk to the end.
+		// Perform the operation on columns kk to the end.
 		impl.Dorgl2(m-kk, n-kk, k-kk, a[kk*lda+kk:], lda, tau[kk:], work)
 	}
 	if kk > 0 {

lapack/gonum/dorgqr.go

@@ -73,7 +73,7 @@ func (impl Implementation) Dorgqr(m, n, k int, a []float64, lda int, tau, work [
 	}
 
 	nbmin := 2 // Minimum block size
-	var nx int // Crossover size from blocked to unbloked code
+	var nx int // Crossover size from blocked to unblocked code
 	iws := n   // Length of work needed
 	var ldwork int
 	if 1 < nb && nb < k {
@@ -100,7 +100,7 @@ func (impl Implementation) Dorgqr(m, n, k int, a []float64, lda int, tau, work [
 		}
 	}
 	if kk < n {
-		// Perform the operation on colums kk to the end.
+		// Perform the operation on columns kk to the end.
 		impl.Dorg2r(m-kk, n-kk, k-kk, a[kk*lda+kk:], lda, tau[kk:], work)
 	}
 	if kk > 0 {

lapack/lapack64/lapack64.go

@@ -465,7 +465,7 @@ func Ggsvd3(jobU, jobV, jobQ lapack.GSVDJob, a, b blas64.General, alpha, beta []
 // On entry, b contains the n×nrhs right-hand side matrix B. On return, it will
 // be overwritten. If ok is true, it will be overwritten by the solution matrix X.
 //
-// Gtsv returns whether the solution X has been successfuly computed.
+// Gtsv returns whether the solution X has been successfully computed.
 //
 // Dgtsv is not part of the lapack.Float64 interface and so calls to Gtsv are
 // always executed by the Gonum implementation.
@@ -621,7 +621,7 @@ func Ormqr(side blas.Side, trans blas.Transpose, a blas64.General, tau []float64
 }
 
 // Pocon estimates the reciprocal of the condition number of a positive-definite
-// matrix A given the Cholesky decmposition of A. The condition number computed
+// matrix A given the Cholesky decomposition of A. The condition number computed
 // is based on the 1-norm and the ∞-norm.
 //
 // anorm is the 1-norm and the ∞-norm of the original matrix A.

lapack/testlapack/dlags2.go

@@ -36,7 +36,7 @@ func Dlags2Test(t *testing.T, impl Dlags2er) {
 			b2 := rnd.Float64()
 			b3 := rnd.Float64()
 
-			// Compute orthogal matrices U, V, Q
+			// Compute orthogonal matrices U, V, Q
 			//  U = [  csu  snu ], V = [  csv snv ], Q = [  csq   snq ]
 			//      [ -snu  csu ]      [ -snv csv ]      [ -snq   csq ]
 			// that transform A and B.

lapack/testlapack/dlarft.go

@@ -80,14 +80,14 @@ func DlarftTest(t *testing.T, impl Dlarfter) {
 				tData := make([]float64, len(tm))
 				copy(tData, tm)
 				if direct == lapack.Forward {
-					// Zero out the lower traingular portion.
+					// Zero out the lower triangular portion.
 					for i := 0; i < k; i++ {
 						for j := 0; j < i; j++ {
 							tData[i*ldt+j] = 0
 						}
 					}
 				} else {
-					// Zero out the upper traingular portion.
+					// Zero out the upper triangular portion.
 					for i := 0; i < k; i++ {
 						for j := i + 1; j < k; j++ {
 							tData[i*ldt+j] = 0

mat/io.go

@@ -287,7 +287,7 @@ func (v VecDense) MarshalBinary() ([]byte, error) {
 // MarshalBinaryTo encodes the receiver into a binary form, writes it to w and
 // returns the number of bytes written and an error if any.
 //
-// See MarshalBainry for the on-disk format.
+// See MarshalBinary for the on-disk format.
 func (v VecDense) MarshalBinaryTo(w io.Writer) (int, error) {
 	header := storage{
 		Form: 'G', Packing: 'F', Uplo: 'A',

mat/matrix.go

@@ -413,7 +413,7 @@ func Cond(a Matrix, norm float64) float64 {
 	return lq.Cond()
 }
 
-// Det returns the determinant of the quare matrix a. In many expressions using
+// Det returns the determinant of the square matrix a. In many expressions using
 // LogDet will be more numerically stable.
 //
 // Det panics with ErrSquare if a is not square and with ErrZeroLength if a has

optimize/convex/lp/simplex.go

@@ -400,7 +400,7 @@ func verifyInputs(initialBasic []int, c []float64, A mat.Matrix, b []float64) er
 
 	// Do some sanity checks so that ab does not become singular during the
 	// simplex solution. If the ZeroRow checks are removed then the code for
-	// finding a set of linearly indepent columns must be improved.
+	// finding a set of linearly independent columns must be improved.
 
 	// Check that if a row of A only has zero elements that corresponding
 	// element in b is zero, otherwise the problem is infeasible.

stat/distmv/normal.go

@@ -97,7 +97,7 @@ func NewNormalPrecision(mu []float64, prec *mat.SymDense, src rand.Source) (norm
 	if dim != len(mu) {
 		panic(badSizeMismatch)
 	}
-	// TODO(btracey): Computing a matrix inverse is generally numerically instable.
+	// TODO(btracey): Computing a matrix inverse is generally numerically unstable.
 	// This only has to compute the inverse of a positive definite matrix, which
 	// is much better, but this still loses precision. It is worth considering if
 	// instead the precision matrix should be stored explicitly and used instead

stat/distuv/beta.go

@@ -89,7 +89,7 @@ func (b Beta) Mean() float64 {
 
 // Mode returns the mode of the distribution.
 //
-// Mode returns NaN if both parametera are less than or equal to 1 as a special case,
+// Mode returns NaN if both parameters are less than or equal to 1 as a special case,
 // 0 if only Alpha <= 1 and 1 if only Beta <= 1.
 func (b Beta) Mode() float64 {
 	if b.Alpha <= 1 {

stat/distuv/logistic.go

@@ -11,7 +11,7 @@ import (
 // Logistic implements the Logistic distribution, a two-parameter distribution with support on the real axis.
 // Its cumulative distribution function is the logistic function.
 //
-// General form of probability density fuction for Logistic distribution is
+// General form of probability density function for Logistic distribution is
 //  E(x) / (s * (1 + E(x))^2)
 //  where E(x) = exp(-(x-μ)/s)
 //

stat/distuv/studentst.go

@@ -35,7 +35,7 @@ type StudentsT struct {
 	// standard deviation by std = Sigma * sqrt(Nu/(Nu-2))
 	Sigma float64
 
-	// Nu is the shape prameter of the distribution, representing the number of
+	// Nu is the shape parameter of the distribution, representing the number of
 	// degrees of the distribution, and one less than the number of observations
 	// from a Normal distribution.
 	Nu float64

stat/samplemv/metropolishastings.go

@@ -190,7 +190,7 @@ func NewProposalNormal(sigma *mat.SymDense, src rand.Source) (*ProposalNormal, b
 // ConditionalLogProb panics if the input slices are not the same length or
 // are not equal to the dimension of the covariance matrix.
 func (p *ProposalNormal) ConditionalLogProb(x, y []float64) (prob float64) {
-	// Either SetMean or LogProb will panic if the slice lengths are innaccurate.
+	// Either SetMean or LogProb will panic if the slice lengths are inaccurate.
 	p.normal.SetMean(y)
 	return p.normal.LogProb(x)
 }

stat/samplemv/samplemv.go

@@ -166,10 +166,10 @@ var ErrRejection = errors.New("rejection: acceptance ratio above 1")
 //
 // The number of proposed locations during sampling can be found with a call to
 // Proposed. If there was an error during sampling, all elements of samples are
-// set to NaN and the error can be accesssed with the Err method. If src != nil,
+// set to NaN and the error can be accessed with the Err method. If src != nil,
 // it will be used to generate random numbers, otherwise rand.Float64 will be used.
 //
-// Target may return the true (log of) the probablity of the location, or it may return
+// Target may return the true (log of) the probability of the location, or it may return
 // a value that is proportional to the probability (logprob + constant). This is
 // useful for cases where the probability distribution is only known up to a normalization
 // constant.

stat/sampleuv/sample.go

@@ -155,10 +155,10 @@ var ErrRejection = errors.New("rejection: acceptance ratio above 1")
 //
 // The number of proposed locations during sampling can be found with a call to
 // Proposed. If there was an error during sampling, all elements of samples are
-// set to NaN and the error can be accesssed with the Err method. If src != nil,
+// set to NaN and the error can be accessed with the Err method. If src != nil,
 // it will be used to generate random numbers, otherwise rand.Float64 will be used.
 //
-// Target may return the true (log of) the probablity of the location, or it may return
+// Target may return the true (log of) the probability of the location, or it may return
 // a value that is proportional to the probability (logprob + constant). This is
 // useful for cases where the probability distribution is only known up to a normalization
 // constant.

stat/stat.go

@@ -562,7 +562,7 @@ func Histogram(count, dividers, x, weights []float64) []float64 {
 // p and q. The Jensen-Shannon divergence is defined as
 //  m = 0.5 * (p + q)
 //  JS(p, q) = 0.5 ( KL(p, m) + KL(q, m) )
-// Unlike Kullback-Liebler, the Jensen-Shannon distance is symmetric. The value
+// Unlike Kullback-Leibler, the Jensen-Shannon distance is symmetric. The value
 // is between 0 and ln(2).
 func JensenShannon(p, q []float64) float64 {
 	if len(p) != len(q) {